STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M231_07830Zinc finger protein. (543 aa)    
Predicted Functional Partners:
M231_07414
Uracil phosphoribosyltransferase.
 
 
    0.709
M231_02967
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
    
 
 0.694
M231_06561
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
    0.569
M231_00861
Nucleolar complex protein 2.
   
    0.569
M231_05200
Zuotin.
   
  
 0.548
M231_05893
50S small subunit ribosomal protein L9e.
 
 
    0.518
M231_07605
WD_REPEATS_REGION domain-containing protein.
   
    0.497
M231_05913
Elongation factor 3.
   
    0.455
M231_07568
Ribosome production factor 2.
   
    0.454
M231_04464
Ubiquitin carboxyl-terminal hydrolase.
 
      0.446
Your Current Organism:
Tremella mesenterica
NCBI taxonomy Id: 5217
Other names: CBS 6973, T. mesenterica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.