Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
M231_00168 | M231_00675 | A0A4Q1BWR4 | A0A4Q1BUY0 | RRM domain-containing protein. | 50S small subunit ribosomal protein L24e. | 0.995 |
M231_00168 | M231_00813 | A0A4Q1BWR4 | A0A4Q1BUL0 | RRM domain-containing protein. | Ribosome biogenesis protein BRX1. | 0.992 |
M231_00168 | M231_02057 | A0A4Q1BWR4 | A0A4Q1BRR7 | RRM domain-containing protein. | Ribosomal RNA methyltransferase Nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.997 |
M231_00168 | M231_03087 | A0A4Q1BWR4 | A0A4Q1BNX2 | RRM domain-containing protein. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.996 |
M231_00168 | M231_03172 | A0A4Q1BWR4 | A0A4Q1BNQ2 | RRM domain-containing protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.995 |
M231_00168 | M231_03211 | A0A4Q1BWR4 | A0A4Q1BP55 | RRM domain-containing protein. | RNA helicase. | 0.996 |
M231_00168 | M231_06889 | A0A4Q1BWR4 | A0A4Q1BFZ1 | RRM domain-containing protein. | 60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.997 |
M231_00168 | M231_06999 | A0A4Q1BWR4 | A0A4Q1BAE9 | RRM domain-containing protein. | Uncharacterized protein. | 0.998 |
M231_00168 | M231_07568 | A0A4Q1BWR4 | A0A4Q1BBN0 | RRM domain-containing protein. | Ribosome production factor 2. | 0.998 |
M231_00168 | YTM1 | A0A4Q1BWR4 | A0A4Q1BE54 | RRM domain-containing protein. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.993 |
M231_00675 | M231_00168 | A0A4Q1BUY0 | A0A4Q1BWR4 | 50S small subunit ribosomal protein L24e. | RRM domain-containing protein. | 0.995 |
M231_00675 | M231_00813 | A0A4Q1BUY0 | A0A4Q1BUL0 | 50S small subunit ribosomal protein L24e. | Ribosome biogenesis protein BRX1. | 0.978 |
M231_00675 | M231_02057 | A0A4Q1BUY0 | A0A4Q1BRR7 | 50S small subunit ribosomal protein L24e. | Ribosomal RNA methyltransferase Nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.990 |
M231_00675 | M231_03087 | A0A4Q1BUY0 | A0A4Q1BNX2 | 50S small subunit ribosomal protein L24e. | Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. | 0.999 |
M231_00675 | M231_03172 | A0A4Q1BUY0 | A0A4Q1BNQ2 | 50S small subunit ribosomal protein L24e. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.995 |
M231_00675 | M231_03211 | A0A4Q1BUY0 | A0A4Q1BP55 | 50S small subunit ribosomal protein L24e. | RNA helicase. | 0.969 |
M231_00675 | M231_06889 | A0A4Q1BUY0 | A0A4Q1BFZ1 | 50S small subunit ribosomal protein L24e. | 60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.990 |
M231_00675 | M231_06999 | A0A4Q1BUY0 | A0A4Q1BAE9 | 50S small subunit ribosomal protein L24e. | Uncharacterized protein. | 0.987 |
M231_00675 | M231_07568 | A0A4Q1BUY0 | A0A4Q1BBN0 | 50S small subunit ribosomal protein L24e. | Ribosome production factor 2. | 0.997 |
M231_00675 | YTM1 | A0A4Q1BUY0 | A0A4Q1BE54 | 50S small subunit ribosomal protein L24e. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.988 |
page 1 of 6