STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M231_05259Uridylate kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and dUMP as phosphate acceptors, but can also use CMP, dCMP and AMP. Belongs to the adenylate kinase family. UMP-CMP kinase subfamily. (293 aa)    
Predicted Functional Partners:
M231_05232
Nucleoside-diphosphate kinase; Belongs to the NDK family.
  
 0.984
M231_01549
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
    
 0.974
M231_05441
Ribonucleoside-diphosphate reductase subunit M2.
     
 0.953
M231_01321
Ribonucleoside-diphosphate reductase subunit M2.
     
 0.953
M231_07313
Uracil phosphoribosyltransferase.
    
 0.944
M231_03932
Uncharacterized protein.
    
 0.906
M231_04681
ATP synthase subunit gamma.
   
 
 0.868
M231_06691
Protein transporter SEC61 subunit alpha.
  
  
 0.849
M231_05596
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
  
 0.849
M231_04514
Translation initiation factor eIF-1A.
  
  
 0.849
Your Current Organism:
Tremella mesenterica
NCBI taxonomy Id: 5217
Other names: CBS 6973, T. mesenterica
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