STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M231_05011dCMP deaminase. (357 aa)    
Predicted Functional Partners:
M231_01794
Thymidylate synthase.
  
 
 0.906
M231_03378
Thymidylate kinase.
    
 0.880
M231_00944
Imidazoleglycerol phosphate synthase, cyclase subunit; Belongs to the HisA/HisF family.
 
      0.776
M231_06556
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
  
  
 0.655
M231_08038
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
     
 0.643
M231_00865
Uncharacterized protein.
  
 0.624
M231_06242
dUTP pyrophosphatase.
  
 0.624
M231_02492
Triosephosphate isomerase.
     
 0.601
M231_07313
Uracil phosphoribosyltransferase.
    
 0.584
M231_07414
Uracil phosphoribosyltransferase.
    
 0.584
Your Current Organism:
Tremella mesenterica
NCBI taxonomy Id: 5217
Other names: CBS 6973, T. mesenterica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.