STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M231_04181Elongation factor 3. (1059 aa)    
Predicted Functional Partners:
M231_05913
Elongation factor 3.
  
 
0.992
M231_07883
Elongation factor 1-gamma.
   
 
 0.990
M231_00131
50S small subunit ribosomal protein L5e.
   
 
 0.988
M231_07868
40S ribosomal protein S9-A; Belongs to the universal ribosomal protein uS4 family.
  
 
 0.987
M231_01626
S4 RNA-binding domain-containing protein.
  
 
 0.987
M231_06643
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.986
M231_04270
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.985
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 
 0.985
M231_07932
U3 small nucleolar ribonucleoprotein IMP3.
  
 
 0.984
M231_03085
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 
 0.983
Your Current Organism:
Tremella mesenterica
NCBI taxonomy Id: 5217
Other names: CBS 6973, T. mesenterica
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