STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M231_04100Pre-mRNA-splicing factor CWC26. (326 aa)    
Predicted Functional Partners:
M231_04951
RNA-binding domain-containing protein, X-linked 2.
   
 0.995
M231_02163
Smad nuclear-interacting protein 1.
   
 0.990
M231_05554
Pre-mRNA-splicing factor CEF1.
  
 
 
 0.985
M231_03262
Pre-mRNA-splicing factor CWC2.
    
 
 0.976
M231_00051
Pre-mRNA-processing factor 19.
    
 
 0.976
M231_07989
Pre-mRNA-splicing helicase BRR2.
    
 
 0.974
M231_00426
Pre-mRNA-processing factor 17.
    
 
 0.964
M231_04933
Splicing factor 3B subunit 2.
    
 
 0.962
M231_01089
Splicing factor 3A subunit 2.
    
 
 0.957
M231_06370
Pre-mRNA-splicing factor CWC22.
   
 
 0.956
Your Current Organism:
Tremella mesenterica
NCBI taxonomy Id: 5217
Other names: CBS 6973, T. mesenterica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.