STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M231_03876BCNT-C domain-containing protein. (302 aa)    
Predicted Functional Partners:
M231_05889
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
   
 
 0.938
M231_01655
SANT domain-containing protein.
   
 
 0.936
M231_07768
Uncharacterized protein.
    
 
 0.910
M231_07443
Histone H2A; Belongs to the histone H2A family.
    
 
 0.903
M231_00718
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 
 0.873
M231_04190
YL1_C domain-containing protein.
   
 
 0.833
M231_07036
Zinc finger HIT domain-containing protein 1.
    
 
 0.804
M231_02162
Uncharacterized protein.
   
 
 0.747
M231_01486
Uncharacterized protein.
    
 
 0.710
M231_04977
Actin-like protein ARP6; Belongs to the actin family.
   
 
 0.592
Your Current Organism:
Tremella mesenterica
NCBI taxonomy Id: 5217
Other names: CBS 6973, T. mesenterica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.