STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M231_03555FHA domain-containing protein. (678 aa)    
Predicted Functional Partners:
M231_07228
Polyubiquitin.
   
 0.768
M231_04354
Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component.
    
 
 0.722
M231_01309
Oxoglutarate dehydrogenase (Succinyl-transferring), E1 component.
    
 
 0.722
M231_05903
Uncharacterized protein.
    
 
 0.711
M231_05908
WD_REPEATS_REGION domain-containing protein.
    
 
 0.673
M231_00448
BRCT domain-containing protein.
    
 0.648
M231_01335
Uncharacterized protein.
    
 0.631
M231_07593
Uncharacterized protein.
    
  0.617
M231_05658
Ubiquitin-40S ribosomal protein S27a.
    
  0.617
M231_05107
Ubiquitin-40S ribosomal protein S27a.
   
  0.600
Your Current Organism:
Tremella mesenterica
NCBI taxonomy Id: 5217
Other names: CBS 6973, T. mesenterica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.