STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M231_03571Uncharacterized protein. (513 aa)    
Predicted Functional Partners:
M231_01004
Uncharacterized protein; Belongs to the peptidase C19 family.
    
 0.626
M231_00849
TATA-box-binding protein.
   
 0.599
M231_05817
Histone acetyltransferase.
    
 0.549
M231_06915
CBFD_NFYB_HMF domain-containing protein.
   
 
 0.496
M231_03570
GATA-type domain-containing protein.
 
      0.491
M231_01532
Transcriptional activator HAP3.
    
 
 0.467
M231_07197
Grx4 family monothiol glutaredoxin.
    
 
 0.466
M231_07443
Histone H2A; Belongs to the histone H2A family.
    
 0.418
M231_00225
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
  0.416
M231_05741
Uncharacterized protein.
    
 0.412
Your Current Organism:
Tremella mesenterica
NCBI taxonomy Id: 5217
Other names: CBS 6973, T. mesenterica
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.