STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M231_02582Uncharacterized protein. (799 aa)    
Predicted Functional Partners:
M231_06638
Pre-mRNA-splicing factor 38A.
   
 0.989
M231_02294
C2H2-type domain-containing protein.
    
  0.986
M231_01027
Uncharacterized protein.
   
 0.985
M231_06801
Pre-mRNA-splicing factor SLT11.
   
 0.973
M231_05554
Pre-mRNA-splicing factor CEF1.
   
  0.972
M231_03005
Pre-mRNA-processing protein 45.
   
 0.972
M231_06948
Protein CWC15.
   
  0.971
M231_07074
Splicing factor 3B subunit 1.
   
 
 0.971
M231_07770
Splicing factor 3B subunit 4.
    
 
 0.970
M231_04356
Pre-mRNA-processing ATP-dependent RNA helicase PRP5.
   
 0.970
Your Current Organism:
Tremella mesenterica
NCBI taxonomy Id: 5217
Other names: CBS 6973, T. mesenterica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.