STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M231_02286Blocked early in transport 1. (157 aa)    
Predicted Functional Partners:
M231_06636
Vesicle transporter SEC22; Belongs to the synaptobrevin family.
   
 0.999
M231_05405
Syntaxin 5.
   
 0.999
M231_06714
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.
   
 0.999
M231_07301
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.998
M231_05261
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.998
M231_05969
Prenylated SNARE protein Ykt6p; Belongs to the synaptobrevin family.
    
 0.994
M231_02793
Uncharacterized protein.
    
 0.948
M231_01194
Alpha-soluble NSF attachment protein.
    
 0.928
M231_02036
Syntaxin 7; Belongs to the syntaxin family.
   
 0.919
M231_06690
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
    
 0.878
Your Current Organism:
Tremella mesenterica
NCBI taxonomy Id: 5217
Other names: CBS 6973, T. mesenterica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.