STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M231_02316Fe2OG dioxygenase domain-containing protein. (943 aa)    
Predicted Functional Partners:
M231_02839
Alanine-glyoxylate transaminase/serine-glyoxylate transaminase/serine-pyruvate transaminase.
  
 
 0.566
M231_07428
Glyco_hydro_15 domain-containing protein.
  
 0.532
M231_00657
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.532
M231_01489
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
   
 
 0.463
M231_06961
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.
   
  0.460
M231_08115
OTU domain-containing protein.
  
 
 0.441
M231_04836
Glyceraldehyde-3-phosphate dehydrogenase.
  
 
 0.441
M231_02346
Phosphoserine transaminase.
     
 0.435
M231_01794
Thymidylate synthase.
  
 
 0.431
M231_02535
Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
   
    0.412
Your Current Organism:
Tremella mesenterica
NCBI taxonomy Id: 5217
Other names: CBS 6973, T. mesenterica
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