STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M231_01857Uncharacterized protein. (445 aa)    
Predicted Functional Partners:
M231_02770
Uncharacterized protein.
   
 
 0.997
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.996
M231_07795
Nucleolar protein 14.
   
 
 0.995
M231_05854
Ribosome biogenesis protein ENP2.
   
 
 0.994
M231_01708
Pre-rRNA-processing protein PNO1.
   
 
 0.994
M231_03212
Utp12 domain-containing protein.
   
 
 0.993
M231_07605
WD_REPEATS_REGION domain-containing protein.
   
 
 0.993
M231_06081
Uncharacterized protein.
   
 
 0.992
M231_04554
Nucleolar protein 58.
   
 
 0.992
M231_02756
U3 small nucleolar RNA-associated protein 7.
   
 
 0.992
Your Current Organism:
Tremella mesenterica
NCBI taxonomy Id: 5217
Other names: CBS 6973, T. mesenterica
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