STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M231_01287Uncharacterized protein. (1278 aa)    
Predicted Functional Partners:
M231_00895
TPR_REGION domain-containing protein.
    
   0.786
M231_06942
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
   0.734
M231_05463
Serum response factor.
    
 
 0.688
M231_05156
Ubiquitin carboxyl-terminal hydrolase.
    
 0.668
M231_02150
Ubiquitin-conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.649
M231_06365
RFX-type winged-helix domain-containing protein.
    
 
 0.646
M231_06078
Uncharacterized protein.
   
 0.610
M231_03709
Ras-GAP domain-containing protein.
   
  
 0.584
M231_06921
Fork-head domain-containing protein.
    
 0.571
M231_03797
Fork-head domain-containing protein.
    
 0.571
Your Current Organism:
Tremella mesenterica
NCBI taxonomy Id: 5217
Other names: CBS 6973, T. mesenterica
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