STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M231_01236Mitochondrial protein. (476 aa)    
Predicted Functional Partners:
M231_03355
Uncharacterized protein.
    
 0.720
M231_00492
Cysteine desulfurase IscS.
    
 0.720
M231_02492
Triosephosphate isomerase.
 
    
 0.619
M231_05967
Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation.
   
 
 0.574
M231_07909
Sua5/YciO/YrdC/YwlC family protein.
  
  
 0.557
M231_07172
tRNA pseudouridine(38-40) synthase.
   
  
 0.529
M231_03212
Utp12 domain-containing protein.
   
    0.520
M231_05110
Uncharacterized protein.
   
    0.495
M231_04539
Ubiquitin-like 1-activating enzyme E1 B.
  
0.477
M231_01684
Ubiquitin-activating enzyme E1 C.
  
 0.477
Your Current Organism:
Tremella mesenterica
NCBI taxonomy Id: 5217
Other names: CBS 6973, T. mesenterica
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.