STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M231_01127Cleavage and polyadenylation specificity factor subunit 2. (938 aa)    
Predicted Functional Partners:
M231_05283
Protein CFT1.
   
 0.999
M231_03210
mRNA 3'-end-processing protein YTH1.
    
 0.999
M231_01385
Endoribonuclease YSH1.
   
0.999
M231_01402
WD_REPEATS_REGION domain-containing protein.
    
 0.999
M231_03749
Uncharacterized protein.
   
 0.998
M231_05381
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 0.994
M231_01125
RNA polymerase II subunit A domain phosphatase SSU72.
   
 0.993
M231_07216
WD_REPEATS_REGION domain-containing protein.
   
 0.991
M231_04465
CID domain-containing protein.
   
 0.991
M231_06697
RRM domain-containing protein.
   
 0.989
Your Current Organism:
Tremella mesenterica
NCBI taxonomy Id: 5217
Other names: CBS 6973, T. mesenterica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.