STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M231_00029BTB domain-containing protein. (1088 aa)    
Predicted Functional Partners:
M231_04217
TFIIB-type domain-containing protein.
   
 0.926
M231_04538
TFIIB-type domain-containing protein.
   
 0.922
M231_03815
TAF domain-containing protein.
   
 0.921
M231_00799
Transcription initiation factor TFIID subunit 1.
    
 0.920
M231_06913
Uncharacterized protein.
    
 0.919
M231_06358
Uncharacterized protein.
    
 0.919
M231_06800
TAFII55_N domain-containing protein.
    
 0.919
M231_07247
Uncharacterized protein.
    
 0.918
M231_02336
Transcription initiation factor TFIID subunit 5.
    
 0.918
M231_06929
Uncharacterized protein.
   
 0.914
Your Current Organism:
Tremella mesenterica
NCBI taxonomy Id: 5217
Other names: CBS 6973, T. mesenterica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.