STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M231_07070Protein transporter SEC13; Belongs to the WD repeat SEC13 family. (386 aa)    
Predicted Functional Partners:
M231_03537
Protein transporter SEC31.
    
 0.999
M231_03208
Peptidase S59 domain-containing protein.
    
 0.999
M231_06690
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.998
M231_02761
Uncharacterized protein; Belongs to the WD repeat SEC13 family.
    
0.998
M231_02293
Uncharacterized protein.
    
 0.998
M231_02156
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.998
M231_02200
Uncharacterized protein.
    
 0.998
M231_01712
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.998
M231_02762
Protein transporter SEC24.
   
 0.998
M231_01698
Protein transporter SEC24.
   
 0.998
Your Current Organism:
Tremella mesenterica
NCBI taxonomy Id: 5217
Other names: CBS 6973, T. mesenterica
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