STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M231_01938Beta-catenin-like protein 1. (627 aa)    
Predicted Functional Partners:
M231_06948
Protein CWC15.
    
 0.996
M231_05554
Pre-mRNA-splicing factor CEF1.
   
 0.996
M231_06360
Pre-mRNA-splicing factor PRP46.
   
 0.993
M231_00051
Pre-mRNA-processing factor 19.
   
 0.980
M231_07134
Pre-mRNA-splicing factor SPF27.
   
 0.979
M231_06710
Uncharacterized protein.
    
  0.938
M231_07445
Uncharacterized protein.
   
 
 0.891
M231_03005
Pre-mRNA-processing protein 45.
   
 
 0.876
M231_06399
Pre-mRNA-splicing factor SYF1.
   
 
 0.852
M231_01089
Splicing factor 3A subunit 2.
   
   0.810
Your Current Organism:
Tremella mesenterica
NCBI taxonomy Id: 5217
Other names: CBS 6973, T. mesenterica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.