STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M231_01856Uncharacterized protein. (1745 aa)    
Predicted Functional Partners:
M231_03088
Uncharacterized protein.
    
 0.980
M231_02573
Pre-mRNA-processing-splicing factor 8.
   
 0.951
M231_01914
Pre-mRNA-processing factor 6.
   
 0.924
M231_00745
Uncharacterized protein.
   
 0.886
M231_01174
Thioredoxin-like protein 4A.
    
 0.882
M231_05406
Small nuclear ribonucleoprotein G.
   
  0.877
M231_05485
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.871
M231_03187
Small nuclear ribonucleoprotein Sm D2.
   
 0.864
M231_06594
Prp8 binding protein.
   
 0.845
M231_07879
Pre-mRNA-splicing factor RSE1.
   
 
 0.812
Your Current Organism:
Tremella mesenterica
NCBI taxonomy Id: 5217
Other names: CBS 6973, T. mesenterica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.