STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421765_00959Unannotated protein. (645 aa)    
Predicted Functional Partners:
GCA_000421765_02173
Unannotated protein.
   
 0.808
GCA_000421765_02230
Unannotated protein.
    
 0.805
GCA_000421765_02255
Unannotated protein.
    
 0.748
GCA_000421765_02073
Unannotated protein.
  
  
 0.738
GCA_000421765_02756
Unannotated protein.
     
 0.704
GCA_000421765_02550
Unannotated protein.
   
 0.699
GCA_000421765_02068
Unannotated protein.
    
 0.676
GCA_000421765_02465
Unannotated protein.
   
 
  0.658
GCA_000421765_00773
Unannotated protein.
   
 0.650
GCA_000421765_01990
Unannotated protein.
   
 0.650
Your Current Organism:
Pseudomonas caeni
NCBI taxonomy Id: 521719
Other names: P. caeni DSM 24390, Pseudomonas caeni DSM 24390, Pseudomonas sp. HY-14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.