STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421765_01922Unannotated protein. (193 aa)    
Predicted Functional Partners:
GCA_000421765_01546
Unannotated protein.
 
 
 0.981
GCA_000421765_00013
Unannotated protein.
  
 
 0.943
GCA_000421765_01547
Unannotated protein.
  
 
 0.943
GCA_000421765_01549
Unannotated protein.
  
 
 0.920
GCA_000421765_02498
Unannotated protein.
  
 
 0.920
GCA_000421765_02080
Unannotated protein.
  
  
 0.915
GCA_000421765_00684
Unannotated protein.
  
 0.866
GCA_000421765_01610
Unannotated protein.
   
 
 0.865
GCA_000421765_02000
Unannotated protein.
   
 
 0.865
GCA_000421765_00280
Unannotated protein.
  
 0.788
Your Current Organism:
Pseudomonas caeni
NCBI taxonomy Id: 521719
Other names: P. caeni DSM 24390, Pseudomonas caeni DSM 24390, Pseudomonas sp. HY-14
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.