STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACV33460.1PFAM: transposase IS66; KEGG: eba:ebA5523 transposase. (465 aa)    
Predicted Functional Partners:
ACV33457.1
PFAM: IS66 Orf2 family protein; KEGG: eba:ebB55 transposase, fragment.
 
   
 0.790
ACV34247.1
PFAM: transposase IS66; KEGG: mgm:Mmc1_1134 transposase IS66.
 
     0.654
ACV33459.1
PFAM: Integrase catalytic region; KEGG: eba:ebA3777 transposase.
 
     0.520
Your Current Organism:
Accumulibacter phosphatis
NCBI taxonomy Id: 522306
Other names: Accumulibacter phosphatis UW-1, C. Accumulibacter phosphatis clade IIA str. UW-1, Candidatus Accumulibacter phosphatis Type IIA str. UW-1, Candidatus Accumulibacter phosphatis clade IIA str. UW-1, Candidatus Accumulibacter phosphatis clade IIA strain UW-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.