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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACV33719.1KEGG: dar:Daro_4187 hypothetical protein. (150 aa)    
Predicted Functional Partners:
ACV33728.1
KEGG: dar:Daro_4174 hypothetical protein.
 
 
 
 0.972
ACV33720.1
KEGG: dar:Daro_4186 hypothetical protein.
 
   
 0.959
ACV33721.1
PFAM: Beta-ketoacyl synthase; KEGG: dar:Daro_4185 3-oxoacyl-(acyl carrier protein) synthase I; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
   
 0.953
ACV33718.1
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: dar:Daro_4188 3-ketoacyl-(acyl-carrier-protein) reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.942
ACV33730.1
Conserved hypothetical protein; KEGG: dar:Daro_4172 transmembrane protein.
 
  
 0.923
ACV33725.1
KEGG: dar:Daro_4177 probable transmembrane protein.
 
   
 0.919
ACV33727.1
PFAM: lipid A biosynthesis acyltransferase; KEGG: dar:Daro_4175 putative lauroyl/myristoyl acyltransferase involved in LPS biosynthesis.
 
   
 0.919
ACV33731.1
KEGG: dar:Daro_4171 acyl carrier protein.
 
   
 0.918
ACV33726.1
Conserved hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
     0.910
ACV33729.1
KEGG: dar:Daro_4173 AMP-dependent synthetase and ligase.
 
     0.910
Your Current Organism:
Accumulibacter phosphatis
NCBI taxonomy Id: 522306
Other names: Accumulibacter phosphatis UW-1, C. Accumulibacter phosphatis clade IIA str. UW-1, Candidatus Accumulibacter phosphatis Type IIA str. UW-1, Candidatus Accumulibacter phosphatis clade IIA str. UW-1, Candidatus Accumulibacter phosphatis clade IIA strain UW-1
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