STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACV33961.1PFAM: ABC-2 type transporter; KEGG: dar:Daro_3395 ABC-2. (250 aa)    
Predicted Functional Partners:
ACV33962.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eba:ebA1306 ATP-binding ABC transporter protein.
  
 0.974
ACV33960.1
PFAM: BolA family protein; KEGG: dar:Daro_3394 BolA-like protein; Belongs to the BolA/IbaG family.
  
    0.811
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
       0.809
ACV33967.1
PFAM: protein of unknown function DUF140; KEGG: eba:ebA1312 predicted ABC-type transport system involved in resistance to organic solvents, permease component.
    
  0.776
ACV33964.1
PFAM: toluene tolerance family protein; KEGG: dar:Daro_3398 toluene tolerance.
 
     0.751
ACV33963.1
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: dar:Daro_3397 NTP binding protein (contains STAS domain).
       0.717
ACV33965.1
PFAM: VacJ family lipoprotein; KEGG: dar:Daro_3399 VacJ-like lipoprotein.
       0.717
ACV33966.1
PFAM: Mammalian cell entry related domain protein; KEGG: dar:Daro_3400 mammalian cell entry related.
       0.695
ACV33968.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eba:ebA1313 putative ATP-binding ABC transporter protein.
       0.664
ACV35506.1
PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; KEGG: dar:Daro_0987 ABC-2:ABC transporter related.
  
 
 0.592
Your Current Organism:
Accumulibacter phosphatis
NCBI taxonomy Id: 522306
Other names: Accumulibacter phosphatis UW-1, C. Accumulibacter phosphatis clade IIA str. UW-1, Candidatus Accumulibacter phosphatis Type IIA str. UW-1, Candidatus Accumulibacter phosphatis clade IIA str. UW-1, Candidatus Accumulibacter phosphatis clade IIA strain UW-1
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