STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACV34519.1TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: dar:Daro_1437 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (532 aa)    
Predicted Functional Partners:
ACV34520.1
TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: dar:Daro_1436 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
ACV34518.1
TIGRFAM: urea ABC transporter, urea binding protein; KEGG: dar:Daro_1443 twin-arginine translocation pathway signal.
 
 
 0.995
ACV34521.1
TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: dar:Daro_1435 ABC transporter related.
 
 
 0.995
ACV34522.1
KEGG: dar:Daro_1434 ABC transporter related; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.995
ACV37693.1
ABC transporter related; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: dar:Daro_4098 inner-membrane translocator:ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.
 
  
0.899
ACV36867.1
PFAM: inner-membrane translocator; KEGG: dar:Daro_0272 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.670
ureE
UreE urease accessory domain protein; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.
 
   
 0.666
ACV35842.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rru:Rru_A1749 ABC transporter component.
 
  
 0.648
ureD
Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
   
 0.637
ACV35841.1
PFAM: inner-membrane translocator; KEGG: rru:Rru_A1750 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
 0.631
Your Current Organism:
Accumulibacter phosphatis
NCBI taxonomy Id: 522306
Other names: Accumulibacter phosphatis UW-1, C. Accumulibacter phosphatis clade IIA str. UW-1, Candidatus Accumulibacter phosphatis Type IIA str. UW-1, Candidatus Accumulibacter phosphatis clade IIA str. UW-1, Candidatus Accumulibacter phosphatis clade IIA strain UW-1
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