Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACV34579.1 | ACV34580.1 | CAP2UW1_1252 | CAP2UW1_1253 | KEGG: amr:AM1_0973 hypothetical protein. | KEGG: rme:Rmet_4200 hypothetical protein. | 0.741 |
ACV34579.1 | ACV34581.1 | CAP2UW1_1252 | CAP2UW1_1254 | KEGG: amr:AM1_0973 hypothetical protein. | PFAM: 17 kDa surface antigen; KEGG: pna:Pnap_1189 17 kDa surface antigen. | 0.506 |
ACV34580.1 | ACV34579.1 | CAP2UW1_1253 | CAP2UW1_1252 | KEGG: rme:Rmet_4200 hypothetical protein. | KEGG: amr:AM1_0973 hypothetical protein. | 0.741 |
ACV34580.1 | ACV34581.1 | CAP2UW1_1253 | CAP2UW1_1254 | KEGG: rme:Rmet_4200 hypothetical protein. | PFAM: 17 kDa surface antigen; KEGG: pna:Pnap_1189 17 kDa surface antigen. | 0.526 |
ACV34581.1 | ACV34579.1 | CAP2UW1_1254 | CAP2UW1_1252 | PFAM: 17 kDa surface antigen; KEGG: pna:Pnap_1189 17 kDa surface antigen. | KEGG: amr:AM1_0973 hypothetical protein. | 0.506 |
ACV34581.1 | ACV34580.1 | CAP2UW1_1254 | CAP2UW1_1253 | PFAM: 17 kDa surface antigen; KEGG: pna:Pnap_1189 17 kDa surface antigen. | KEGG: rme:Rmet_4200 hypothetical protein. | 0.526 |
ACV34581.1 | ACV34592.1 | CAP2UW1_1254 | CAP2UW1_1265 | PFAM: 17 kDa surface antigen; KEGG: pna:Pnap_1189 17 kDa surface antigen. | KEGG: rme:Rmet_1904 hypothetical protein. | 0.543 |
ACV34581.1 | bamA | CAP2UW1_1254 | CAP2UW1_2868 | PFAM: 17 kDa surface antigen; KEGG: pna:Pnap_1189 17 kDa surface antigen. | Outer membrane protein assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.676 |
ACV34592.1 | ACV34581.1 | CAP2UW1_1265 | CAP2UW1_1254 | KEGG: rme:Rmet_1904 hypothetical protein. | PFAM: 17 kDa surface antigen; KEGG: pna:Pnap_1189 17 kDa surface antigen. | 0.543 |
bamA | ACV34581.1 | CAP2UW1_2868 | CAP2UW1_1254 | Outer membrane protein assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | PFAM: 17 kDa surface antigen; KEGG: pna:Pnap_1189 17 kDa surface antigen. | 0.676 |