Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACV33447.1 | ACV36001.1 | CAP2UW1_0074 | CAP2UW1_2718 | KEGG: pth:PTH_1110 hypothetical protein. | KEGG: aba:Acid345_0352 hypothetical protein. | 0.519 |
ACV34330.1 | ACV36001.1 | CAP2UW1_0994 | CAP2UW1_2718 | KEGG: sat:SYN_02034 hypothetical cytosolic protein. | KEGG: aba:Acid345_0352 hypothetical protein. | 0.453 |
ACV36001.1 | ACV33447.1 | CAP2UW1_2718 | CAP2UW1_0074 | KEGG: aba:Acid345_0352 hypothetical protein. | KEGG: pth:PTH_1110 hypothetical protein. | 0.519 |
ACV36001.1 | ACV34330.1 | CAP2UW1_2718 | CAP2UW1_0994 | KEGG: aba:Acid345_0352 hypothetical protein. | KEGG: sat:SYN_02034 hypothetical cytosolic protein. | 0.453 |
ACV36001.1 | ACV36509.1 | CAP2UW1_2718 | CAP2UW1_3240 | KEGG: aba:Acid345_0352 hypothetical protein. | PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Hemolysin-type calcium-binding region; Proprotein convertase P; KEGG: ana:all0364 similar to prohormone convertase. | 0.516 |
ACV36001.1 | ACV36527.1 | CAP2UW1_2718 | CAP2UW1_3262 | KEGG: aba:Acid345_0352 hypothetical protein. | PFAM: lipolytic protein G-D-S-L family; KEGG: dar:Daro_2714 lipolytic enzyme, G-D-S-L. | 0.450 |
ACV36001.1 | ACV36897.1 | CAP2UW1_2718 | CAP2UW1_3640 | KEGG: aba:Acid345_0352 hypothetical protein. | PFAM: lipolytic protein G-D-S-L family; KEGG: azo:azo2123 putative acyl-CoA thioesterase I. | 0.450 |
ACV36001.1 | dksA | CAP2UW1_2718 | CAP2UW1_2719 | KEGG: aba:Acid345_0352 hypothetical protein. | Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. | 0.402 |
ACV36509.1 | ACV36001.1 | CAP2UW1_3240 | CAP2UW1_2718 | PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Hemolysin-type calcium-binding region; Proprotein convertase P; KEGG: ana:all0364 similar to prohormone convertase. | KEGG: aba:Acid345_0352 hypothetical protein. | 0.516 |
ACV36527.1 | ACV36001.1 | CAP2UW1_3262 | CAP2UW1_2718 | PFAM: lipolytic protein G-D-S-L family; KEGG: dar:Daro_2714 lipolytic enzyme, G-D-S-L. | KEGG: aba:Acid345_0352 hypothetical protein. | 0.450 |
ACV36527.1 | ACV36897.1 | CAP2UW1_3262 | CAP2UW1_3640 | PFAM: lipolytic protein G-D-S-L family; KEGG: dar:Daro_2714 lipolytic enzyme, G-D-S-L. | PFAM: lipolytic protein G-D-S-L family; KEGG: azo:azo2123 putative acyl-CoA thioesterase I. | 0.925 |
ACV36897.1 | ACV36001.1 | CAP2UW1_3640 | CAP2UW1_2718 | PFAM: lipolytic protein G-D-S-L family; KEGG: azo:azo2123 putative acyl-CoA thioesterase I. | KEGG: aba:Acid345_0352 hypothetical protein. | 0.450 |
ACV36897.1 | ACV36527.1 | CAP2UW1_3640 | CAP2UW1_3262 | PFAM: lipolytic protein G-D-S-L family; KEGG: azo:azo2123 putative acyl-CoA thioesterase I. | PFAM: lipolytic protein G-D-S-L family; KEGG: dar:Daro_2714 lipolytic enzyme, G-D-S-L. | 0.925 |
dksA | ACV36001.1 | CAP2UW1_2719 | CAP2UW1_2718 | Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. | KEGG: aba:Acid345_0352 hypothetical protein. | 0.402 |