STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACV36321.1PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dar:Daro_1317 binding-protein-dependent transport systems inner membrane component. (325 aa)    
Predicted Functional Partners:
ACV36320.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dar:Daro_1318 binding-protein-dependent transport systems inner membrane component.
 
 0.999
ACV36319.1
KEGG: dar:Daro_1319 oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 0.996
ACV36322.1
PFAM: extracellular solute-binding protein family 5; KEGG: dar:Daro_1224 extracellular solute-binding protein, family 5.
 
 
 0.992
ACV36323.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dar:Daro_1935 enoyl-[acyl-carrier-protein] reductase [NADH].
       0.518
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
  
  
 0.491
ACV36324.1
Hypothetical protein.
       0.454
ACV36325.1
KEGG: pol:Bpro_2832 hypothetical protein.
       0.454
ACV35763.1
PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: dar:Daro_2201 ErfK/YbiS/YcfS/YnhG.
 
     0.416
Your Current Organism:
Accumulibacter phosphatis
NCBI taxonomy Id: 522306
Other names: Accumulibacter phosphatis UW-1, C. Accumulibacter phosphatis clade IIA str. UW-1, Candidatus Accumulibacter phosphatis Type IIA str. UW-1, Candidatus Accumulibacter phosphatis clade IIA str. UW-1, Candidatus Accumulibacter phosphatis clade IIA strain UW-1
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