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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACV36475.1PFAM: major facilitator superfamily MFS_1; KEGG: afw:Anae109_0029 major facilitator superfamily MFS_1. (436 aa)    
Predicted Functional Partners:
ACV36474.1
PFAM: aldo/keto reductase; KEGG: bbr:BB2876 hypothetical protein.
 
     0.940
ACV36476.1
PFAM: intradiol ring-cleavage dioxygenase; KEGG: pmy:Pmen_0474 intradiol ring-cleavage dioxygenase.
       0.773
ACV36473.1
PFAM: protein of unknown function UPF0153; KEGG: dar:Daro_1132 hypothetical protein.
       0.500
ACV36477.1
Hypothetical protein.
       0.493
ACV36472.1
PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: dar:Daro_1891 ferredoxin:(2Fe-2S)-binding.
       0.490
ACV36471.1
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: dar:Daro_1892 twin-arginine translocation pathway signal.
       0.487
ACV36469.1
KEGG: dar:Daro_1894 hypothetical protein.
       0.485
ACV36470.1
PFAM: protein of unknown function DUF182; KEGG: dar:Daro_1893 protein of unknown function DUF182.
       0.485
Your Current Organism:
Accumulibacter phosphatis
NCBI taxonomy Id: 522306
Other names: Accumulibacter phosphatis UW-1, C. Accumulibacter phosphatis clade IIA str. UW-1, Candidatus Accumulibacter phosphatis Type IIA str. UW-1, Candidatus Accumulibacter phosphatis clade IIA str. UW-1, Candidatus Accumulibacter phosphatis clade IIA strain UW-1
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