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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACV36478.1KEGG: gur:Gura_2107 hypothetical protein. (200 aa)    
Predicted Functional Partners:
ACV36479.1
KEGG: nmu:Nmul_A0869 proline-rich region.
       0.691
ACV33912.1
KEGG: dar:Daro_3490 hypothetical protein.
  
     0.635
ACV35356.1
TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; KEGG: hau:Haur_4713 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
  
  
 0.573
ACV37077.1
PFAM: FlgN family protein; KEGG: net:Neut_2438 FlgN family protein.
  
     0.482
ACV33952.1
PFAM: Thioredoxin domain; KEGG: reu:Reut_B4067 probable thioredoxin.
  
     0.466
ACV33606.1
SMART: Rhodanese domain protein; KEGG: eba:ebA4122 rhodanese-like protein.
  
     0.437
ACV36480.1
TIGRFAM: transcriptional regulator, ArgP family; PFAM: regulatory protein LysR; KEGG: saq:Sare_3123 transcriptional regulator, LysR family.
       0.411
Your Current Organism:
Accumulibacter phosphatis
NCBI taxonomy Id: 522306
Other names: Accumulibacter phosphatis UW-1, C. Accumulibacter phosphatis clade IIA str. UW-1, Candidatus Accumulibacter phosphatis Type IIA str. UW-1, Candidatus Accumulibacter phosphatis clade IIA str. UW-1, Candidatus Accumulibacter phosphatis clade IIA strain UW-1
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