node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACV34744.1 | folD | CAP2UW1_1420 | CAP2UW1_1830 | Polysaccharide deacetylase; PFAM: formyl transferase domain protein; polysaccharide deacetylase; KEGG: rba:RB7144 probable predicted xylanase/chitin deacetylase. | Methylenetetrahydrofolate dehydrogenase (NADP(+)); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.504 |
ACV34744.1 | nusB | CAP2UW1_1420 | CAP2UW1_4317 | Polysaccharide deacetylase; PFAM: formyl transferase domain protein; polysaccharide deacetylase; KEGG: rba:RB7144 probable predicted xylanase/chitin deacetylase. | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.782 |
folD | ACV34744.1 | CAP2UW1_1830 | CAP2UW1_1420 | Methylenetetrahydrofolate dehydrogenase (NADP(+)); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | Polysaccharide deacetylase; PFAM: formyl transferase domain protein; polysaccharide deacetylase; KEGG: rba:RB7144 probable predicted xylanase/chitin deacetylase. | 0.504 |
folD | nusB | CAP2UW1_1830 | CAP2UW1_4317 | Methylenetetrahydrofolate dehydrogenase (NADP(+)); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.807 |
folD | ribH | CAP2UW1_1830 | CAP2UW1_4318 | Methylenetetrahydrofolate dehydrogenase (NADP(+)); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.434 |
nusA | nusB | CAP2UW1_2968 | CAP2UW1_4317 | NusA antitermination factor; Participates in both transcription termination and antitermination. | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.932 |
nusA | nusG | CAP2UW1_2968 | CAP2UW1_3505 | NusA antitermination factor; Participates in both transcription termination and antitermination. | NusG antitermination factor; Participates in transcription elongation, termination and antitermination. | 0.986 |
nusA | rpoZ | CAP2UW1_2968 | CAP2UW1_0931 | NusA antitermination factor; Participates in both transcription termination and antitermination. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.936 |
nusA | rpsD | CAP2UW1_2968 | CAP2UW1_3469 | NusA antitermination factor; Participates in both transcription termination and antitermination. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.968 |
nusA | rpsJ | CAP2UW1_2968 | CAP2UW1_3494 | NusA antitermination factor; Participates in both transcription termination and antitermination. | Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.980 |
nusB | ACV34744.1 | CAP2UW1_4317 | CAP2UW1_1420 | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | Polysaccharide deacetylase; PFAM: formyl transferase domain protein; polysaccharide deacetylase; KEGG: rba:RB7144 probable predicted xylanase/chitin deacetylase. | 0.782 |
nusB | folD | CAP2UW1_4317 | CAP2UW1_1830 | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | Methylenetetrahydrofolate dehydrogenase (NADP(+)); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.807 |
nusB | nusA | CAP2UW1_4317 | CAP2UW1_2968 | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.932 |
nusB | nusG | CAP2UW1_4317 | CAP2UW1_3505 | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | NusG antitermination factor; Participates in transcription elongation, termination and antitermination. | 0.873 |
nusB | ribB | CAP2UW1_4317 | CAP2UW1_4319 | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.901 |
nusB | ribH | CAP2UW1_4317 | CAP2UW1_4318 | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.977 |
nusB | rpoZ | CAP2UW1_4317 | CAP2UW1_0931 | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.865 |
nusB | rpsD | CAP2UW1_4317 | CAP2UW1_3469 | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.761 |
nusB | rpsJ | CAP2UW1_4317 | CAP2UW1_3494 | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.906 |
nusB | thiL | CAP2UW1_4317 | CAP2UW1_4316 | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.756 |