STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CANINC_003242Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (423 aa)    
Predicted Functional Partners:
CANINC_001860
Rhomboid domain-containing protein.
    
 
 0.949
CANINC_004061
L-type lectin-like domain-containing protein.
   
 
 0.713
CANINC_001943
PX domain-containing protein.
    
   0.709
CANINC_002098
E3 ubiquitin protein ligase.
   
  
 0.672
CANINC_001946
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
     
  0.578
CANINC_001139
ULP_PROTEASE domain-containing protein.
      
 0.534
CANINC_000991
Aminotran_1_2 domain-containing protein.
   
  
 0.512
CANINC_002994
acidPPc domain-containing protein.
    
   0.479
CANINC_002349
acidPPc domain-containing protein.
    
   0.479
CANINC_000354
acidPPc domain-containing protein.
    
   0.479
Your Current Organism:
Candida inconspicua
NCBI taxonomy Id: 52247
Other names: ATCC 16783, CBS 180, CCRC 21658, CCRC:21658, DBVPG 3707, IFO 0621, JCM 9555, NRRL Y-2029, Torulopsis inconspicua, VKM Y-740, [. inconspicua, [Candida] inconspicua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.