STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CANINC_003010Lactamase_B domain-containing protein. (267 aa)    
Predicted Functional Partners:
CANINC_004623
Rhodanese domain-containing protein.
  
 0.940
CANINC_002863
FAD-binding PCMH-type domain-containing protein.
    
 0.919
CANINC_004102
FAD-binding PCMH-type domain-containing protein.
    
 0.918
CANINC_002687
FAD-binding PCMH-type domain-containing protein.
    
 0.918
CANINC_001539
FAD-binding PCMH-type domain-containing protein.
    
 0.918
CANINC_002848
Uncharacterized protein.
  
 
 0.915
CANINC_000164
D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.809
CANINC_002295
Uncharacterized protein.
  
 0.807
CANINC_000508
4-hydroxyphenylpyruvate dioxygenase.
  
 
 0.805
CANINC_003372
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.794
Your Current Organism:
Candida inconspicua
NCBI taxonomy Id: 52247
Other names: ATCC 16783, CBS 180, CCRC 21658, CCRC:21658, DBVPG 3707, IFO 0621, JCM 9555, NRRL Y-2029, Torulopsis inconspicua, VKM Y-740, [. inconspicua, [Candida] inconspicua
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