STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CANINC_001913Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation. (439 aa)    
Predicted Functional Partners:
CANINC_001096
Uncharacterized protein.
    
 0.999
CANINC_001543
Uncharacterized protein.
    
 0.999
CANINC_004587
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.994
CANINC_003627
Uncharacterized protein.
    
 0.993
CANINC_000831
SGF29 C-terminal domain-containing protein.
    
 0.990
CANINC_000544
ThiF domain-containing protein.
    
 0.989
CANINC_000638
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.987
CANINC_003857
Bromo domain-containing protein.
    
 0.981
CANINC_004234
TFIID_20kDa domain-containing protein.
    
 0.981
CANINC_001517
Uncharacterized protein.
   
 0.974
Your Current Organism:
Candida inconspicua
NCBI taxonomy Id: 52247
Other names: ATCC 16783, CBS 180, CCRC 21658, CCRC:21658, DBVPG 3707, IFO 0621, JCM 9555, NRRL Y-2029, Torulopsis inconspicua, VKM Y-740, [. inconspicua, [Candida] inconspicua
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