STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD66919.1PFAM: aminotransferase class I and II; KEGG: msu:MS1248 AvtA protein. (374 aa)    
Predicted Functional Partners:
ADD69708.1
Chorismate mutase; KEGG: gur:Gura_1462 prephenate dehydratase; TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; Chorismate mutase.
 
  
 0.928
ADD66921.1
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: geo:Geob_0985 pyridoxamine 5'-phosphate oxidase-related FMN-binding.
       0.782
ADD66920.1
PFAM: protein of unknown function DUF55; KEGG: mca:MCA0353 hypothetical protein.
     
 0.778
ADD66918.1
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: gbm:Gbem_0757 methyltransferase type 11.
       0.773
ADD66915.1
PFAM: protein of unknown function DUF534; KEGG: oan:Oant_0867 hypothetical protein.
       0.761
ADD66916.1
PFAM: inner-membrane translocator; KEGG: dps:DP3101 hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
       0.757
ADD66917.1
KEGG: gsu:GSU0212 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.757
ADD67077.1
PFAM: NAD(P)H dehydrogenase (quinone); KEGG: ccv:CCV52592_0505 general stress protein 14 (GSP14).
   
    0.555
ADD68457.1
KEGG: pca:Pcar_0377 NifJ-like oxidoreductase, Fe-S subunit; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; Pyruvate-flavodoxin oxidoreductase, EKR domain.
  
  
 0.466
ADD68300.1
PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase; KEGG: geo:Geob_2882 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)), phosphate acetyltransferase.
  
 
 0.463
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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