Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADD66919.1PFAM: aminotransferase class I and II; KEGG: msu:MS1248 AvtA protein. (374 aa)    
Predicted Functional Partners:
ADD69708.1
Chorismate mutase; KEGG: gur:Gura_1462 prephenate dehydratase; TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; Chorismate mutase.
 
  
 0.927
ADD66921.1
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: geo:Geob_0985 pyridoxamine 5'-phosphate oxidase-related FMN-binding.
       0.778
ADD66920.1
PFAM: protein of unknown function DUF55; KEGG: mca:MCA0353 hypothetical protein.
     
 0.777
ADD66918.1
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: gbm:Gbem_0757 methyltransferase type 11.
     
 0.774
ADD66915.1
PFAM: protein of unknown function DUF534; KEGG: oan:Oant_0867 hypothetical protein.
       0.760
ADD66916.1
PFAM: inner-membrane translocator; KEGG: dps:DP3101 hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
       0.757
ADD66917.1
KEGG: gsu:GSU0212 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.757
ADD66909.1
PFAM: ferredoxin-dependent glutamate synthase; 4Fe- 4S ferredoxin iron-sulfur binding domain protein; KEGG: gme:Gmet_1756 glutamate synthase (NADPH) GltB2 subunit.
  
  
 0.506
ADD66914.1
PFAM: TOBE domain protein; KEGG: shm:Shewmr7_2558 molybdenum-pterin binding protein.
       0.458
ADD68189.1
KEGG: gme:Gmet_1629 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding.
 
 
 0.425
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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