Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD66921.1PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: geo:Geob_0985 pyridoxamine 5'-phosphate oxidase-related FMN-binding. (153 aa)    
Predicted Functional Partners:
ADD66919.1
PFAM: aminotransferase class I and II; KEGG: msu:MS1248 AvtA protein.
       0.778
ADD66918.1
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: gbm:Gbem_0757 methyltransferase type 11.
       0.773
ADD66920.1
PFAM: protein of unknown function DUF55; KEGG: mca:MCA0353 hypothetical protein.
       0.773
ADD66915.1
PFAM: protein of unknown function DUF534; KEGG: oan:Oant_0867 hypothetical protein.
       0.757
ADD66916.1
PFAM: inner-membrane translocator; KEGG: dps:DP3101 hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
       0.757
ADD66917.1
KEGG: gsu:GSU0212 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.757
ADD66914.1
PFAM: TOBE domain protein; KEGG: shm:Shewmr7_2558 molybdenum-pterin binding protein.
 
     0.529
ADD66923.1
ybaK/ebsC protein; KEGG: bba:Bd2844 hypothetical protein; TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.
       0.447
ADD66922.1
KEGG: gem:GM21_0378 hypothetical protein.
       0.423
mdh
Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
   
    0.404
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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