Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD66928.1TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: dps:DP0513 toxin secretion ATP-binding protein; SMART: AAA ATPase. (715 aa)    
Predicted Functional Partners:
ADD66929.1
KEGG: dps:DP0514 secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein.
 
 0.994
ADD66925.1
KEGG: dps:DP0512 outer membrane (agglutination) protein; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: OmpA/MotB domain protein; outer membrane efflux protein.
 
  
 0.973
ADD66926.1
PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: ccv:CCV52592_0161 periplasmic protein.
 
   
 0.959
ADD66927.1
Diguanylate cyclase/phosphodiesterase with extracellular sensor; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: ccv:CCV52592_0162 endonuclease IV; SMART: EAL domain protein; GGDEF domain containing protein.
 
   
 0.945
pstB
Phosphate ABC transporter, ATPase subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
     
0.899
ADD68917.1
KEGG: gem:GM21_2285 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
     
0.899
ADD66930.1
Transcriptional regulator, LuxR family; KEGG: dps:DP0515 two-component system response regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR.
 
    0.853
ADD67589.1
PFAM: secretion protein HlyD family protein; KEGG: geo:Geob_1779 secretion protein HlyD family protein.
  
 
 0.812
ADD69148.1
KEGG: tcx:Tcr_0454 secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.812
ADD69497.1
KEGG: dde:Dde_1562 secretion protein HlyD.
  
 
 0.812
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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