Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD66938.1KEGG: dps:DP3065 hypothetical protein. (216 aa)    
Predicted Functional Partners:
ADD66935.1
PFAM: protein of unknown function DUF182; KEGG: shl:Shal_0645 hypothetical protein.
 
  
 0.972
ADD66941.1
PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: dps:DP3068 4-hydroxybenzoyl-CoA reductase HcrB.
 
  
 0.964
ADD66939.1
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: dps:DP3066 4-hydroxybenzoyl-CoA reductase HcrA.
 
   
 0.952
ADD66936.1
TIGRFAM: selenium-dependent molybdenum hydroxylase system protein, YqeB family; KEGG: aha:AHA_2167 xanthine dehydrogenase accessory factor.
 
     0.948
ADD66940.1
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: dps:DP3067 4-hydroxybenzoyl-CoA reductase (HcrC).
 
  
 0.939
ADD66937.1
KEGG: dps:DP3064 hypothetical protein.
 
     0.927
ADD67223.1
KEGG: nam:NAMH_1292 hypothetical protein; TIGRFAM: selenium metabolism protein YedF; PFAM: SirA family protein; Belongs to the sulfur carrier protein TusA family.
 
   
 0.616
ADD68610.1
Molybdopterin binding domain protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
     0.571
ADD68563.1
Hypothetical protein; KEGG: vfi:VF_A0099 glutamate synthase.
 
    0.406
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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