STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD67024.1PFAM: carbon starvation protein CstA; KEGG: afw:Anae109_4235 carbon starvation protein CstA. (475 aa)    
Predicted Functional Partners:
rbsD
RbsD or FucU transport; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
  
    0.682
ADD67022.1
PFAM: inner-membrane translocator; KEGG: vha:VIBHAR_06144 ribose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
    0.681
rbsA
ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
  
 0.654
ADD67023.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: vha:VIBHAR_06143 D-ribose transporter subunit RbsB.
  
    0.647
ADD68019.1
PFAM: AMP-dependent synthetase and ligase; KEGG: dma:DMR_17770 acetyl-coenzyme A synthetase.
   
  
 0.636
ADD68850.1
PFAM: Na+/H+ antiporter NhaC-like; TRAP C4- dicarboxylate transport system permease DctM subunit; KEGG: ypy:YPK_0600 Na+/H+ antiporter NhaC.
  
    0.599
ADD68277.1
PFAM: Proline dehydrogenase; KEGG: dps:DP2492 proline dehydrogenase.
   
  
 0.573
ADD67844.1
PFAM: Aldehyde Dehydrogenase; KEGG: ara:Arad_7566 aldehyde dehydrogenase protein.
   
    0.536
ADD68278.1
KEGG: dat:HRM2_16880 PutA2; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde Dehydrogenase.
   
    0.536
ADD68391.1
PFAM: Aldehyde Dehydrogenase; KEGG: geo:Geob_3547 aldehyde dehydrogenase.
   
    0.536
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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