Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD67024.1PFAM: carbon starvation protein CstA; KEGG: afw:Anae109_4235 carbon starvation protein CstA. (475 aa)    
Predicted Functional Partners:
ADD67022.1
PFAM: inner-membrane translocator; KEGG: vha:VIBHAR_06144 ribose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
    0.695
ADD67023.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: vha:VIBHAR_06143 D-ribose transporter subunit RbsB.
  
  
 0.658
rbsA
ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
  
 0.633
rbsD
RbsD or FucU transport; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
  
    0.606
ADD68775.1
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: abu:Abu_1136 hypothetical protein.
  
    0.540
ADD68871.1
PFAM: inner-membrane translocator; KEGG: pfo:Pfl01_2339 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
   
    0.495
ispH
Hydroxymethylbutenyl pyrophosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
     
 0.457
ADD68850.1
PFAM: Na+/H+ antiporter NhaC-like; TRAP C4- dicarboxylate transport system permease DctM subunit; KEGG: ypy:YPK_0600 Na+/H+ antiporter NhaC.
  
     0.448
ADD68870.1
KEGG: pfo:Pfl01_2338 ABC transporter-like; PFAM: ABC transporter related; SMART: AAA ATPase.
   
  
 0.425
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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