Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ADD67035.1KEGG: dat:HRM2_15830 RND efflux transporter, outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein. (468 aa)    
Predicted Functional Partners:
ADD67034.1
KEGG: dat:HRM2_15820 RND efflux pump (AcrB/AcrD/AcrF family protein); TIGRFAM: transporter, hydrophobe/amphiphile efflux- 1 (HAE1) family; PFAM: acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 0.999
ADD67033.1
Efflux transporter, RND family, MFP subunit; KEGG: dat:HRM2_15810 RND efflux transporter (HlyD family secretion protein); TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.991
ADD69148.1
KEGG: tcx:Tcr_0454 secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.926
ADD68247.1
KEGG: pol:Bpro_5559 secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; biotin/lipoyl attachment domain-containing protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.897
ADD69149.1
PFAM: acriflavin resistance protein; KEGG: gme:Gmet_3127 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.873
ADD68246.1
PFAM: acriflavin resistance protein; KEGG: pol:Bpro_5560 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.869
ADD67032.1
Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: dat:HRM2_15800 putative HTH-type transcriptional regulator.
 
   
 0.734
ADD67589.1
PFAM: secretion protein HlyD family protein; KEGG: geo:Geob_1779 secretion protein HlyD family protein.
 
 
 0.718
ADD66929.1
KEGG: dps:DP0514 secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein.
  
 
 0.588
ADD69497.1
KEGG: dde:Dde_1562 secretion protein HlyD.
  
 
 0.588
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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