Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD67036.1KEGG: geo:Geob_1650 transcriptional regulator, BadM/Rrf2 family; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074. (154 aa)    
Predicted Functional Partners:
ADD68015.1
KEGG: afw:Anae109_0637 cysteine desulfurase; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase.
  
  
 0.584
ADD69162.1
KEGG: cysteine desulfurase, mitochondrial precursor; K04487 cysteine desulfurase; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase.
  
  
 0.584
ADD68016.1
KEGG: pca:Pcar_1859 NifU-like protein; TIGRFAM: FeS cluster assembly scaffold protein NifU; PFAM: nitrogen-fixing NifU domain protein.
  
  
 0.577
ADD67037.1
PFAM: protein of unknown function DUF541; KEGG: noc:Noc_0087 hypothetical protein.
       0.403
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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