Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADD67037.1PFAM: protein of unknown function DUF541; KEGG: noc:Noc_0087 hypothetical protein. (239 aa)    
Predicted Functional Partners:
ADD67038.1
Hypothetical protein; KEGG: hch:HCH_00750 chromosome segregation ATPase.
       0.636
ADD67039.1
KEGG: dol:Dole_0797 hypothetical protein.
       0.636
ADD67743.1
KEGG: dal:Dalk_3524 hypothetical protein.
  
     0.526
ADD68378.1
KEGG: dde:Dde_2152 hypothetical protein.
  
     0.524
ADD68373.1
SMART: Tetratricopeptide repeat; KEGG: dde:Dde_2157 TPR repeat-containing protein.
  
     0.476
ADD69075.1
KEGG: nam:NAMH_1100 flagellar motor switch protein FliG; TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG.
   
   0.438
ADD67092.1
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
   
   0.412
ADD67036.1
KEGG: geo:Geob_1650 transcriptional regulator, BadM/Rrf2 family; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074.
       0.403
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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