Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADD67046.1PFAM: protein of unknown function DUF262; KEGG: gbm:Gbem_2969 protein of unknown function DUF262. (380 aa)    
Predicted Functional Partners:
ADD67047.1
Hypothetical protein.
       0.773
ADD67045.1
PFAM: Phosphoglycerate mutase; KEGG: dat:HRM2_04170 phosphoglycerate/bisphosphoglycerate mutase family protein; Belongs to the phosphoglycerate mutase family.
       0.467
ADD67097.1
PFAM: peptidase C14 caspase catalytic subunit p20; KEGG: sml:Smlt4692 putative polysaccharide deacetylase family protein.
  
     0.455
ADD67389.1
KEGG: sat:SYN_01886 DNA transfer in the process of conjugation and F pilus assembly protein.
   
 
 0.422
ADD67642.1
KEGG: hypothetical protein; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide repeat.
  
     0.411
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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