STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD67051.1Hypothetical protein; KEGG: afr:AFE_3195 Tn5468, orf5. (505 aa)    
Predicted Functional Partners:
ADD67052.1
KEGG: afe:Lferr_0143 hypothetical protein.
       0.741
ADD67053.1
KEGG: spc:Sputcn32_3945 transposon Tn7 transposition protein TnsC.
       0.617
ADD67054.1
KEGG: afr:AFE_1202 Tn5468, transposase protein B.
       0.617
ADD67055.1
PFAM: TnsA endonuclease; KEGG: abm:ABSDF3566 putative transposon Tn7-like transposition protein A (TnsA-like).
       0.617
ADD67050.1
KEGG: vei:Veis_3738 ATPase central domain- containing protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase.
       0.512
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.