STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD67099.1KEGG: abu:Abu_0465 quinohemoprotein amine dehydrogenase, 60 kDa subunit. (81 aa)    
Predicted Functional Partners:
ADD67098.1
KEGG: gme:Gmet_1443 flavin reductase-like, FMN- binding.
       0.785
ADD67100.1
KEGG: geo:Geob_1109 phospholipase D/transphosphatidylase; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase.
       0.771
engB
Ribosome biogenesis GTP-binding protein YsxC; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
       0.768
ADD67102.1
PFAM: phosphoesterase DHHA1; KEGG: nis:NIS_1127 hypothetical protein.
       0.768
ADD67103.1
PFAM: protein of unknown function UPF0047; KEGG: mfa:Mfla_2363 hypothetical protein.
       0.689
ADD69050.1
Peptidase A24A domain protein; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
   
  
 0.617
ADD67136.1
PFAM: Type II secretion system F domain; KEGG: ilo:IL0371 type II secretory pathway.
  
  
 0.586
ADD67290.1
PFAM: Type II secretion system F domain; KEGG: sdn:Sden_0123 general secretion pathway protein F.
  
  
 0.586
ADD67137.1
KEGG: nis:NIS_1563 general secretory pathway protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase.
  
  
 0.536
ADD67289.1
Type II secretion system protein E; KEGG: cti:RALTA_A2997 general secretory pathway E protein, ATPase component; PFAM: type II secretion system protein E; SMART: AAA ATPase.
  
  
 0.536
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.