STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADD67105.1PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: sfu:Sfum_2752 cobalamin (vitamin B12) biosynthesis CbiM protein. (341 aa)    
Predicted Functional Partners:
ADD67106.1
KEGG: sfu:Sfum_1102 cobalt ABC transporter, inner membrane subunit CbiQ; TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein.
 
 0.998
ADD67107.1
Cobalt ABC transporter, ATPase subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
 0.998
ADD67732.1
PFAM: cobalt transport protein; KEGG: ppr:PBPRA2241 putative ABC transporter, membrane-spanning permease.
  
 
 0.894
ADD69712.1
Hypothetical protein; KEGG: sat:SYN_00208 ABC-type cobalt transport system, permease component.
  
 
 0.894
ADD66963.1
PFAM: Precorrin-6x reductase CbiJ/CobK; KEGG: kpn:KPN_03191 cobalt-precorrin-6x reductase.
  
  
 0.731
ADD69136.1
PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase; KEGG: pca:Pcar_2400 NCAIR mutase (PurE)-related proteins.
 
    0.723
ADD67104.1
Transcriptional regulator NikR, CopG family; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family.
     
 0.708
ADD66965.1
PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: pca:Pcar_0472 cobalamin biosynthesis protein CbiG.
  
  
 0.706
ADD69036.1
PFAM: Queuosine synthesis-like; KEGG: cco:CCC13826_1003 hypothetical protein.
 
    0.693
ADD69465.1
PFAM: protein of unknown function DUF111; KEGG: gsu:GSU0141 hypothetical protein; Belongs to the LarC family.
 
    0.643
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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