Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD67106.1KEGG: sfu:Sfum_1102 cobalt ABC transporter, inner membrane subunit CbiQ; TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein. (269 aa)    
Predicted Functional Partners:
ADD67107.1
Cobalt ABC transporter, ATPase subunit; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
 0.998
ADD67105.1
PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: sfu:Sfum_2752 cobalamin (vitamin B12) biosynthesis CbiM protein.
 
 
 0.995
ADD67733.1
KEGG: hha:Hhal_0379 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 0.810
ADD68544.1
KEGG: pol:Bpro_4337 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 
 0.716
ADD67104.1
Transcriptional regulator NikR, CopG family; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family.
     
 0.647
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.489
ADD68594.1
PFAM: NADPH-dependent FMN reductase; KEGG: geo:Geob_0527 NADPH-dependent FMN reductase.
  
     0.476
ADD68907.1
ABC-3 protein; KEGG: dat:HRM2_34160 putative ABC-type manganese/zinc transport system, permease component; PFAM: ABC-3 protein; iron dependent repressor; transport system permease protein; SMART: iron dependent repressor.
    
 0.449
ADD67103.1
PFAM: protein of unknown function UPF0047; KEGG: mfa:Mfla_2363 hypothetical protein.
       0.442
ADD67750.1
PFAM: extracellular solute-binding protein family 5; KEGG: maq:Maqu_1538 extracellular solute-binding protein.
    
 0.415
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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