Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADD67137.1KEGG: nis:NIS_1563 general secretory pathway protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase. (556 aa)    
Predicted Functional Partners:
ADD67136.1
PFAM: Type II secretion system F domain; KEGG: ilo:IL0371 type II secretory pathway.
 
 
 0.990
ADD67290.1
PFAM: Type II secretion system F domain; KEGG: sdn:Sden_0123 general secretion pathway protein F.
 
 
 0.958
ADD69050.1
Peptidase A24A domain protein; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
 
 0.884
ADD67285.1
KEGG: aeh:Mlg_2391 general secretion pathway protein G; TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G.
 
 
 0.811
ADD69451.1
KEGG: geo:Geob_1116 twitching motility protein.
  
 0.794
ADD67148.1
PFAM: type II and III secretion system protein; KEGG: dps:DP0113 type II protein secretion protein; Belongs to the bacterial secretin family.
 
  
 0.686
ADD67288.1
KEGG: dat:HRM2_11310 GspD1; TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein.
 
  
 0.670
ADD67084.1
TIGRFAM: type IV pilus assembly protein PilM; KEGG: acp:A2cp1_0675 type IV pilus assembly protein PilM.
 
 
 
 0.669
ADD67142.1
KEGG: sde:Sde_1352 hypothetical protein.
  
 
 0.587
ADD67284.1
Hypothetical protein; KEGG: sbl:Sbal_3828 methylation site containing protein.
  
 
 0.587
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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