Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ADD67142.1KEGG: sde:Sde_1352 hypothetical protein. (211 aa)    
Predicted Functional Partners:
ADD67143.1
Histidine kinase; KEGG: tcx:Tcr_0471 ATP-binding region, ATPase-like; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
       0.773
ADD67144.1
KEGG: tcx:Tcr_0470 two component fis family transcriptional regulator; PFAM: response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver.
       0.773
ADD67282.1
Hypothetical protein; KEGG: pap:PSPA7_2035 general secretion pathway protein J.
  
 
 0.742
ADD67281.1
Hypothetical protein; KEGG: glo:Glov_1274 general secretion pathway protein K.
  
 
 0.716
ADD67137.1
KEGG: nis:NIS_1563 general secretory pathway protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase.
  
 
 0.587
ADD67289.1
Type II secretion system protein E; KEGG: cti:RALTA_A2997 general secretory pathway E protein, ATPase component; PFAM: type II secretion system protein E; SMART: AAA ATPase.
  
 
 0.587
ADD67148.1
PFAM: type II and III secretion system protein; KEGG: dps:DP0113 type II protein secretion protein; Belongs to the bacterial secretin family.
  
  
 0.586
ADD67136.1
PFAM: Type II secretion system F domain; KEGG: ilo:IL0371 type II secretory pathway.
  
  
 0.562
ADD67290.1
PFAM: Type II secretion system F domain; KEGG: sdn:Sden_0123 general secretion pathway protein F.
  
  
 0.562
ADD67145.1
Hypothetical protein.
       0.560
Your Current Organism:
Denitrovibrio acetiphilus
NCBI taxonomy Id: 522772
Other names: D. acetiphilus DSM 12809, Denitrovibrio acetiphilus DSM 12809, Denitrovibrio acetiphilus N2460, Denitrovibrio acetiphilus str. DSM 12809, Denitrovibrio acetiphilus strain DSM 12809
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